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Human genetic variation is an important determinant of the outcome of infection with Mycobacterium tuberculosis. We have conducted a two-stage genome-wide linkage study to search for regions of the human genome containing tuberculosis-susceptibility genes. This approach uses sibpair families that contain two full siblings who have both been affected by clinical tuberculosis. For any chromosomal region containing a major tuberculosis-susceptibility gene, affected sibpairs inherit the same parental alleles more often than expected by chance. In the first round of the screen, 299 highly informative genetic markers, spanning the entire human genome, were typed in 92 sibpairs from The Gambia and South Africa. Seven chromosomal regions that showed provisional evidence of coinheritance with clinical tuberculosis were identified. To identify whether any of these regions contained a potential tuberculosis-susceptibility gene, 22 markers from these regions were genotyped in a second set of 81 sibpairs from the same countries. Markers on chromosomes 15q and Xq showed suggestive evidence of linkage (lod = 2.00 and 1.77, respectively) to tuberculosis. The potential identification of susceptibility loci on both chromosomes 15q and Xq was supported by an independent analysis designated common ancestry using microsatellite mapping. These results indicate that genome-wide linkage analysis can contribute to the mapping and identification of major genes for multifactorial infectious diseases of humans. An X chromosome susceptibility gene may contribute to the excess of males with tuberculosis observed in many different populations.

Original publication

DOI

10.1073/pnas.140201897

Type

Journal article

Journal

Proc Natl Acad Sci U S A

Publication Date

05/07/2000

Volume

97

Pages

8005 - 8009

Keywords

Adolescent, Chromosome Mapping, Chromosomes, Human, Pair 15, Ethnic Groups, Gambia, Genetic Linkage, Genetic Markers, Genetic Predisposition to Disease, Genetic Testing, Genome, Human, Genotype, Humans, Microsatellite Repeats, Nuclear Family, South Africa, Tuberculosis, Pulmonary, X Chromosome